I think I can understand in a limited way the processes involved as you are trying to explain them. However from my point of view I still don't see how it negates a creator at the beginning, or even during each of those processes. I'm still of the firm belief in intelligent design.
I guess when it comes to the divide between man and apes (as well as all other animals), to me it's the differences rather than the similarities that cause me to believe in an intelligent designer. Man's spirituality...
His capabilty of complex languages... His creative abilties... His inbuilt morality... His love of beauty... His abilty to express himself in music... His understanding of history and ..... science
The evidence presented hasn't negated the possibility of a creator of some sort, but it has overwhelmingly shown that this creator wasn't the Abrahamic god. Man is not a separate creation, apart from the animals. There was no Adam and Eve. There was no "fall" and no need for Jesus' sacrifice. If you want to believe in a sort of Deist god (an impersonal force of some kind that created everything then ignored us afterward), have at it, but this is almost never the case. What we always see is someone making a general Deist argument, then magically attaching all of the Judeo-Christian attributes to this creative force without justifying the leap.
What you're making is a God of the Gaps argument... an Argument from Ignorance, as Cofty has said (and I want to echo Cofty's sentiment that 'ignorance' is not used as a pejorative; it's the name of a type of argument).
For centuries, "God" was used to explain everything we didn't have an answer for. God created the sun and moon and made them go around the earth. God made it rain, and brought tornadoes and floods and volcanic eruptions. God taught us language and love and morality and the other intangible, numinous qualities of our existence.
There were thousands of phenomena used as evidence of a God. But over time we discovered the natural explanations for them. There is no god in the clouds hurling thunderbolts down to earth, etc… Today those thousands have shrunk to just a few questions that science has not yet worked out the answers to. As we figure them out, your list will shrink further.
In fact, I’d say morality has already pretty much been figured out… at least to the extent that we can come up with pretty good ideas of where it came from. (There isn’t a morality rulebook encoded in our genes. Morality is just a word used to describe how we social animals have learned to cooperate in order to survive and thrive.) The presence of the foundations of morality—reciprocity and empathy—in other mammals shows it’s not something unique to humans… our more complex brains have simply allowed us to come up with more complex moral codes.
Here’s a fascinating TED Talk about this: http://www.ted.com/talks/frans_de_waal_do_animals_have_morals.html
There will always be a few gaps that we can insert “goddidit” into, and there is a certain comfort in believing there is someone up there looking out for us individually. But especially after leaving the JWs, I don’t want to believe something because it feels good, or makes me feel special. I want my beliefs to be based on the evidence.